Genome-wide DNA methylation analysis identifies epigenetic markers and drivers in hepatocellular carcinoma

Please contact with Jin Gu (wellgoo@gmail.com)

DNA Methylation    DS1    DS2    DS3    DS4    [Sample Information]

Gene Expression    DS2    DS3

Table 1. The datasets used in this study.

Dataset

DNA Methylation

Gene Expression

Source

#T a

#NT b

Source

#T

#NT

DS1

GSE54503

66

66

 

 

 

DS2

GSE56588

224

19

GSE63898

228

168

DS3

TCGA c

353

49

TCGA

356

49

DS4

PUMCH d

10

10

 

 

 

a) The number of the tumor samples.
b) The number of the non-tumor samples.
c) Only the patients from LIHC annotated with ˇ°Hepatocellular Carcinomaˇ± are used.
d) An additional validation cohort.

ˇˇ